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Merged
merged 15 commits into from
Mar 23, 2018
Merged

Fix/dcm2niix #2498

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6ecd4a9
ref: dcm2niix interface
mgxd Mar 16, 2018
26d82fe
tst: add datalad/dcm2niix to testing
mgxd Mar 16, 2018
b60b4d8
fix: dcm2niix doctest
mgxd Mar 16, 2018
6d7bb8d
tst: move dcm2niix test to circle
mgxd Mar 16, 2018
43c43a7
fix: forgotten changes
mgxd Mar 16, 2018
4c2e885
tst: remove dcm2niix and datalad testing until neurodocker fixes
mgxd Mar 16, 2018
ec72e99
tst: add check for dcm2niix executable
mgxd Mar 16, 2018
140b715
enh: add version checking
mgxd Mar 17, 2018
e904bbb
fix: version parsing
mgxd Mar 17, 2018
7ba24f1
doc: add test [skip-ci]
mgxd Mar 19, 2018
333c5a3
Merge branch 'fix/dcm2niix' of github.com:mgxd/nipype into fix/dcm2niix
mgxd Mar 19, 2018
715de9c
Merge branch 'master' of git://github.com/nipy/nipype into fix/dcm2niix
mgxd Mar 19, 2018
dd0503f
fix: address review comments
mgxd Mar 23, 2018
c92289b
Merge branch 'master' of git://github.com/nipy/nipype into fix/dcm2niix
mgxd Mar 23, 2018
41c45b9
fix: argstr and doctest
mgxd Mar 23, 2018
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tst: add datalad/dcm2niix to testing
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@mgxd
mgxd committed Mar 16, 2018
commit 26d82feddec1df8703df8d385a163162f3d83ac8
4 changes: 2 additions & 2 deletions .travis.yml
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Expand Up @@ -12,7 +12,7 @@ python:
env:
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=false NIPYPE_EXTRAS="doc,tests,fmri,profiler" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler,duecredit,ssh" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler,duecredit,ssh,data" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler" PIP_FLAGS="--pre" CI_SKIP_TEST=1

addons:
Expand All @@ -31,7 +31,7 @@ before_install:
- travis_retry bash <(wget -q -O- http://neuro.debian.net/_files/neurodebian-travis.sh);
- if $INSTALL_DEB_DEPENDECIES; then
travis_retry sudo apt-get -y update &&
travis_retry sudo apt-get install -y -qq fsl afni elastix fsl-atlases;
travis_retry sudo apt-get install -y -qq fsl afni elastix fsl-atlases dcm2niix;
fi;
- if $INSTALL_DEB_DEPENDECIES; then
source /etc/fsl/fsl.sh;
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1 change: 1 addition & 0 deletions nipype/info.py
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Expand Up @@ -165,6 +165,7 @@ def get_nipype_gitversion():
'xvfbwrapper': ['xvfbwrapper'],
'pybids': ['pybids'],
'ssh': ['paramiko'],
'data': ['datalad']
# 'mesh': ['mayavi'] # Enable when it works
}

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