kostrykin

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Leonid Kostrykin kostrykin

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Post-doc at @BMCV

20 followers · 11 following

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kostrykin/README.md

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https://orcid.org/0000-0003-1323-3762

https://mstdn.science/@kostrykin

https://twitter.com/l_kostrykin

https://www.instagram.com/l.kostrykin

https://hub.docker.com/u/kostrykin

Recent contributions to #usegalaxy:

^{_{Generated using https://github.com/kostrykin/galaxy-community-activities}}

Research and tools:

Image segmentation: SuperDSM, segmetrics

Real-time 3D visualization: RWTHmediTEC/Carna, LibCarna, LibCarna-Python

Auxiliary toolboxes: repype

Actions: report-test-coverage-action

Teaching repositories:

Codespaces: python-learning-codespace, mobi-devcontainer-python

Actions: build-latex-document-action, current-semester-action, label-semester-issue-action

Personal side-projects: https://github.com/kosmotive

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BMCV/SuperDSM BMCV/SuperDSM Public

SuperDSM is a globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images and beyond.

Python 3 2
BMCV/segmetrics BMCV/segmetrics Public

Image segmentation and object detection performance measures

Python 2
BMCV/galaxy-image-analysis BMCV/galaxy-image-analysis Public

Galaxy Image Analysis is an ELIXIR Service for computer-based image analysis in Galaxy.

Python 19 20
flatironinstitute/sparse_dot flatironinstitute/sparse_dot Public

Python wrapper for Intel Math Kernel Library (MKL) matrix multiplication

Python 91 11
LibCarna LibCarna Public

Forked from RWTHmediTEC/Carna

Real-time 3D visualization of biomedical data and beyond

C 1
LibCarna-Python LibCarna-Python Public

Real-time 3D visualization for biomedical data and beyond in Python

C++ 13