Transformer
This pipeline component lets you use transformer models in your pipeline. It supports all models that are available via the HuggingFace transformers library. Usually you will connect subsequent components to the shared transformer using the TransformerListener layer. This works similarly to spaCy’s Tok2Vec component and Tok2VecListener sublayer.
The component assigns the output of the transformer to the Doc’s extension attributes. We also calculate an alignment between the word-piece tokens and the spaCy tokenization, so that we can use the last hidden states to set the Doc.tensor attribute. When multiple word-piece tokens align to the same spaCy token, the spaCy token receives the sum of their values. To access the values, you can use the custom Doc._.trf_data attribute. The package also adds the function registries @span_getters and @annotation_setters with several built-in registered functions. For more details, see the usage documentation.
Assigned Attributes
The component sets the following custom extension attribute:
| Location | Value |
|---|---|
Doc._.trf_data | Transformer tokens and outputs for the Doc object. TransformerData |
Config and implementation
The default config is defined by the pipeline component factory and describes how the component should be configured. You can override its settings via the config argument on nlp.add_pipe or in your config.cfg for training. See the model architectures documentation for details on the transformer architectures and their arguments and hyperparameters.
| Setting | Description |
|---|---|
max_batch_items | Maximum size of a padded batch. Defaults to 4096. int |
set_extra_annotations | Function that takes a batch of Doc objects and transformer outputs to set additional annotations on the Doc. The Doc._.trf_data attribute is set prior to calling the callback. Defaults to null_annotation_setter (no additional annotations). Callable[[List[Doc],FullTransformerBatch], None] |
model | The Thinc Model wrapping the transformer. Defaults to TransformerModel. Model[List[Doc],FullTransformerBatch] |
explosion/spacy-transformers/master/spacy_transformers/pipeline_component.py
Transformer.__init__ method
Construct a Transformer component. One or more subsequent spaCy components can use the transformer outputs as features in its model, with gradients backpropagated to the single shared weights. The activations from the transformer are saved in the Doc._.trf_data extension attribute. You can also provide a callback to set additional annotations. In your application, you would normally use a shortcut for this and instantiate the component using its string name and nlp.add_pipe.
| Name | Description |
|---|---|
vocab | The shared vocabulary. Vocab |
model | The Thinc Model wrapping the transformer. Usually you will want to use the TransformerModel layer for this. Model[List[Doc],FullTransformerBatch] |
set_extra_annotations | Function that takes a batch of Doc objects and transformer outputs and stores the annotations on the Doc. The Doc._.trf_data attribute is set prior to calling the callback. By default, no additional annotations are set. Callable[[List[Doc],FullTransformerBatch], None] |
| keyword-only | |
name | String name of the component instance. Used to add entries to the losses during training. str |
max_batch_items | Maximum size of a padded batch. Defaults to 128*32. int |
Transformer.__call__ method
Apply the pipe to one document. The document is modified in place, and returned. This usually happens under the hood when the nlp object is called on a text and all pipeline components are applied to the Doc in order. Both __call__ and pipe delegate to the predict and set_annotations methods.
| Name | Description |
|---|---|
doc | The document to process. Doc |
| RETURNS | The processed document. Doc |
Transformer.pipe method
Apply the pipe to a stream of documents. This usually happens under the hood when the nlp object is called on a text and all pipeline components are applied to the Doc in order. Both __call__ and pipe delegate to the predict and set_annotations methods.
| Name | Description |
|---|---|
stream | A stream of documents. Iterable[Doc] |
| keyword-only | |
batch_size | The number of documents to buffer. Defaults to 128. int |
| YIELDS | The processed documents in order. Doc |
Transformer.initialize method
Initialize the component for training and return an Optimizer. get_examples should be a function that returns an iterable of Example objects. At least one example should be supplied. The data examples are used to initialize the model of the component and can either be the full training data or a representative sample. Initialization includes validating the network, inferring missing shapes and setting up the label scheme based on the data. This method is typically called by Language.initialize.
| Name | Description |
|---|---|
get_examples | Function that returns gold-standard annotations in the form of Example objects. Must contain at least one Example. Callable[[], Iterable[Example]] |
| keyword-only | |
nlp | The current nlp object. Defaults to None. Optional[Language] |
Transformer.predict method
Apply the component’s model to a batch of Doc objects without modifying them.
| Name | Description |
|---|---|
docs | The documents to predict. Iterable[Doc] |
| RETURNS | The model’s prediction for each document. |
Transformer.set_annotations method
Assign the extracted features to the Doc objects. By default, the TransformerData object is written to the Doc._.trf_data attribute. Your set_extra_annotations callback is then called, if provided.
| Name | Description |
|---|---|
docs | The documents to modify. Iterable[Doc] |
scores | The scores to set, produced by Transformer.predict. |
Transformer.update method
Prepare for an update to the transformer. Like the Tok2Vec component, the Transformer component is unusual in that it does not receive “gold standard” annotations to calculate a weight update. The optimal output of the transformer data is unknown – it’s a hidden layer inside the network that is updated by backpropagating from output layers.
The Transformer component therefore does not perform a weight update during its own update method. Instead, it runs its transformer model and communicates the output and the backpropagation callback to any downstream components that have been connected to it via the TransformerListener sublayer. If there are multiple listeners, the last layer will actually backprop to the transformer and call the optimizer, while the others simply increment the gradients.
| Name | Description |
|---|---|
examples | A batch of Example objects. Only the Example.predicted Doc object is used, the reference Doc is ignored. Iterable[Example] |
| keyword-only | |
drop | The dropout rate. float |
sgd | An optimizer. Will be created via create_optimizer if not set. Optional[Optimizer] |
losses | Optional record of the loss during training. Updated using the component name as the key. Optional[Dict[str, float]] |
| RETURNS | The updated losses dictionary. Dict[str, float] |
Transformer.create_optimizer method
Create an optimizer for the pipeline component.
| Name | Description |
|---|---|
| RETURNS | The optimizer. Optimizer |
Transformer.use_params methodcontextmanager
Modify the pipe’s model to use the given parameter values. At the end of the context, the original parameters are restored.
| Name | Description |
|---|---|
params | The parameter values to use in the model. dict |
Transformer.to_disk method
Serialize the pipe to disk.
| Name | Description |
|---|---|
path | A path to a directory, which will be created if it doesn’t exist. Paths may be either strings or Path-like objects. Union[str,Path] |
| keyword-only | |
exclude | String names of serialization fields to exclude. Iterable[str] |
Transformer.from_disk method
Load the pipe from disk. Modifies the object in place and returns it.
| Name | Description |
|---|---|
path | A path to a directory. Paths may be either strings or Path-like objects. Union[str,Path] |
| keyword-only | |
exclude | String names of serialization fields to exclude. Iterable[str] |
| RETURNS | The modified Transformer object. Transformer |
Transformer.to_bytes method
Serialize the pipe to a bytestring.
| Name | Description |
|---|---|
| keyword-only | |
exclude | String names of serialization fields to exclude. Iterable[str] |
| RETURNS | The serialized form of the Transformer object. bytes |
Transformer.from_bytes method
Load the pipe from a bytestring. Modifies the object in place and returns it.
| Name | Description |
|---|---|
bytes_data | The data to load from. bytes |
| keyword-only | |
exclude | String names of serialization fields to exclude. Iterable[str] |
| RETURNS | The Transformer object. Transformer |
Serialization fields
During serialization, spaCy will export several data fields used to restore different aspects of the object. If needed, you can exclude them from serialization by passing in the string names via the exclude argument.
| Name | Description |
|---|---|
vocab | The shared Vocab. |
cfg | The config file. You usually don’t want to exclude this. |
model | The binary model data. You usually don’t want to exclude this. |
TransformerData dataclass
Transformer tokens and outputs for one Doc object. The transformer models return tensors that refer to a whole padded batch of documents. These tensors are wrapped into the FullTransformerBatch object. The FullTransformerBatch then splits out the per-document data, which is handled by this class. Instances of this class are typically assigned to the Doc._.trf_data extension attribute.
| Name | Description |
|---|---|
tokens | A slice of the tokens data produced by the tokenizer. This may have several fields, including the token IDs, the texts and the attention mask. See the transformers.BatchEncoding object for details. dict |
model_output | The model output from the transformer model, determined by the model and transformer config. New in spacy-transformers v1.1.0. transformers.file_utils.ModelOutput |
tensors | The model_output in the earlier transformers tuple format converted using ModelOutput.to_tuple(). Returns Tuple instead of List as of spacy-transformers v1.1.0. Tuple[Union[FloatsXd, List[FloatsXd]]] |
align | Alignment from the Doc’s tokenization to the wordpieces. This is a ragged array, where align.lengths[i] indicates the number of wordpiece tokens that token i aligns against. The actual indices are provided at align[i].dataXd. Ragged |
width | The width of the last hidden layer. int |
TransformerData.empty classmethod
Create an empty TransformerData container.
| Name | Description |
|---|---|
| RETURNS | The container. TransformerData |
In spacy-transformers v1.0, the model output is stored in TransformerData.tensors as List[Union[FloatsXd]] and only includes the activations for the Doc from the transformer. Usually the last tensor that is 3-dimensional will be the most important, as that will provide the final hidden state. Generally activations that are 2-dimensional will be attention weights. Details of this variable will differ depending on the underlying transformer model.
FullTransformerBatch dataclass
Holds a batch of input and output objects for a transformer model. The data can then be split to a list of TransformerData objects to associate the outputs to each Doc in the batch.
| Name | Description |
|---|---|
spans | The batch of input spans. The outer list refers to the Doc objects in the batch, and the inner list are the spans for that Doc. Note that spans are allowed to overlap or exclude tokens, but each Span can only refer to one Doc (by definition). This means that within a Doc, the regions of the output tensors that correspond to each Span may overlap or have gaps, but for each Doc, there is a non-overlapping contiguous slice of the outputs. List[List[Span]] |
tokens | The output of the tokenizer. transformers.BatchEncoding |
model_output | The model output from the transformer model, determined by the model and transformer config. New in spacy-transformers v1.1.0. transformers.file_utils.ModelOutput |
tensors | The model_output in the earlier transformers tuple format converted using ModelOutput.to_tuple(). Returns Tuple instead of List as of spacy-transformers v1.1.0. Tuple[Union[torch.Tensor, Tuple[torch.Tensor]]] |
align | Alignment from the spaCy tokenization to the wordpieces. This is a ragged array, where align.lengths[i] indicates the number of wordpiece tokens that token i aligns against. The actual indices are provided at align[i].dataXd. Ragged |
doc_data | The outputs, split per Doc object. List[TransformerData] |
FullTransformerBatch.unsplit_by_doc method
Return a new FullTransformerBatch from a split batch of activations, using the current object’s spans, tokens and alignment. This is used during the backward pass, in order to construct the gradients to pass back into the transformer model.
| Name | Description |
|---|---|
arrays | The split batch of activations. List[List[Floats3d]] |
| RETURNS | The transformer batch. FullTransformerBatch |
FullTransformerBatch.split_by_doc method
Split a TransformerData object that represents a batch into a list with one TransformerData per Doc.
| Name | Description |
|---|---|
| RETURNS | The split batch. List[TransformerData] |
In spacy-transformers v1.0, the model output is stored in FullTransformerBatch.tensors as List[torch.Tensor].
Span getters
Span getters are functions that take a batch of Doc objects and return a lists of Span objects for each doc to be processed by the transformer. This is used to manage long documents by cutting them into smaller sequences before running the transformer. The spans are allowed to overlap, and you can also omit sections of the Doc if they are not relevant.
Span getters can be referenced in the [components.transformer.model.get_spans] block of the config to customize the sequences processed by the transformer. You can also register custom span getters using the @spacy.registry.span_getters decorator.
| Name | Description |
|---|---|
docs | A batch of Doc objects. Iterable[Doc] |
| RETURNS | The spans to process by the transformer. List[List[Span]] |
doc_spans.v1 registered function
Create a span getter that uses the whole document as its spans. This is the best approach if your Doc objects already refer to relatively short texts.
sent_spans.v1 registered function
Create a span getter that uses sentence boundary markers to extract the spans. This requires sentence boundaries to be set (e.g. by the Sentencizer), and may result in somewhat uneven batches, depending on the sentence lengths. However, it does provide the transformer with more meaningful windows to attend over.
To set sentence boundaries with the sentencizer during training, add a sentencizer to the beginning of the pipeline and include it in [training.annotating_components] to have it set the sentence boundaries before the transformer component runs.
strided_spans.v1 registered function
Create a span getter for strided spans. If you set the window and stride to the same value, the spans will cover each token once. Setting stride lower than window will allow for an overlap, so that some tokens are counted twice. This can be desirable, because it allows all tokens to have both a left and right context.
| Name | Description |
|---|---|
window | The window size. int |
stride | The stride size. int |
Annotation setters registered functions
Annotation setters are functions that take a batch of Doc objects and a FullTransformerBatch and can set additional annotations on the Doc, e.g. to set custom or built-in attributes. You can register custom annotation setters using the @registry.annotation_setters decorator.
| Name | Description |
|---|---|
docs | A batch of Doc objects. List[Doc] |
trf_data | The transformers data for the batch. FullTransformerBatch |
The following built-in functions are available:
| Name | Description |
|---|---|
spacy-transformers.null_annotation_setter.v1 | Don’t set any additional annotations. |