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1. staphscope-typing-tool staphscope-typing-tool Public

   StaphScope is a comprehensive bioinformatics tool for Staphylococcus aureus genomic analysis including MLST typing, spa typing, SCCmec analysis, antimicrobial resistance detection, virulence factor…

   Python 9

2. EcoliTyper EcoliTyper Public

   EcoliTyper: A species-optimized computational pipeline for comprehensive genotyping and surveillance of Escherichia coli. Perfect for clinical microbiology, outbreak investigations, and genomic res…

   C 5

3. MEscope MEscope Public

   MEscope is a lightweight CLI tool for analyzing multi-omics data in ME/CFS. It integrates ERV activity, viral signals, gene expression, and methylation patterns to identify disease-associated bioma…

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4. Multi-Bacteria-Genomic-Workflow Multi-Bacteria-Genomic-Workflow Public

   Multi-Bacteria Genomic Workflow

   1

5. pneumoscope pneumoscope Public

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6. VIRA VIRA Public

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