bugphyzz is a collection of bacterial physiological features to be used as a resource for physiological discovery and producing signatures. We are continuously curating bugphyzz databases through 3 main methods: webscraping, bulk download from online databases, and manual curation from literature. Mainly this database was concieved for analyzing microbiome data using physiological information. Bugphyzz can allow a user to look at specific physiologies, and create signature sets with specific bugs. The uniform structure of the data is what allows for the latter to manifest.
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") ##Release version BiocManager::install("bugphyzz") ## Devel version BiocManager::install("waldronlab/bugphyzz")After installation, check vignettes with:
browseVigenttes("bugphyzz")