GoekeLab / bambu Star 223 Code Issues Pull requests Discussions Reference-guided transcript discovery and quantification for long read RNA-Seq data rna-seq r nanopore bioconductor transcriptomics rna-seq-analysis transcript-quantification bambu long-reads nanopore-sequencing transcript-reconstruction Updated Oct 9, 2025 R
aljpetri / isONform Star 34 Code Issues Pull requests De novo construction of isoforms from long-read data transcriptomics oxford-nanopore bioinformatics-tool reference-free pacbio-iso-seq transcript-reconstruction annotation-free Updated Jun 10, 2025 Python