Python package built around protein structure and dynamics. OpenBabel-inspired objects.
Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.
A Python-based parser and analysis tool for Protein Data Bank (PDB) files. The project aims to facilitate the manipulation of PDB files, enabling users to extract and compute various structural properties of proteins, such as counting amino acid residues and calculating distances between atoms.
Użyteczności związane z parsowaniem plików .pdb oraz zdalnym dostępem do baz danych Pfam i UniProt.
A complicated method to download all PDB sequences for free has been explained here. Also, a youtube video has been made for easier understanding. Check out the link in ReadME. The downloaded sequences are further cleaned for modeling purposes.
The scope of this module is downloading or reading PDB-Files and subsequently parsing them
Python program that can identify the residues interacting between chains of a complex protein.
List the protein chains and ligands in structural file(s). #Haku
Add a description, image, and links to the pdb-parser topic page so that developers can more easily learn about it.
To associate your repository with the pdb-parser topic, visit your repo's landing page and select "manage topics."