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Bio_scripts

Practical, reusable scripts for bioinformatics .

sequence tools for FASTA/Q files: fasta2tab, tab2fasta, fasta_extract_by_pattern, fasta_common_seqs, fasta_locate_motif, fasta_remove_duplicates, fastx_translate, fasta_gc_skew.plot ... util moved to https://github.com/shenwei356/datakit plot plot scripts: heatmap ... blast NCBI BLAST+ wrappers file_formats genbank->gtf, bam2gff, gff2fa ... enzyme analysis of restrict enzymes protein Batch compute pI of protein biology get insert from sanger sequencing result for_education scripts with detail comments, for education not_used older version of some scripts 

See README in sub derectories.


Copyright (c) 2014-2015, Wei Shen (shenwei356@gmail.com)

MIT License

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Practical, reusable scripts for bioinformatics

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