AFNI fixed by latest master

nipype/interfaces/base.py

@@ -1472,23 +1472,6 @@ def _filename_from_source(self, name):
  if trait_spec.keep_extension and ext:
  return retval
  return self._overload_extension(retval)
- elif isdefined(retval):
- if "%s" in retval:
- if isinstance(trait_spec.name_source, list):
- for ns in trait_spec.name_source:
- if isdefined(getattr(self.inputs, ns)):
- name_source = ns
- break
- else:
- name_source = trait_spec.name_source
- if name_source.endswith(os.path.sep):
- name_source = name_source[:-len(os.path.sep)]
- _, base, _ = split_filename(getattr(self.inputs, name_source))
- retval = os.path.abspath(retval % base)
- _, _, ext = split_filename(retval)
- if trait_spec.keep_extension and ext:
- return retval
- return self._overload_extension(retval)
  return retval
 
  def _gen_filename(self, name):