STY: Apply ruff/flake8-pie rules (PIE)

[DimitriPapadopoulos]

Summary

Apply flake8-pie (PIE) rules, except:

• PIE794 (doesn't help here)

[codecov]

Codecov Report

Attention: Patch coverage is 20.00000% with 12 lines in your changes missing coverage. Please review.

Project coverage is 70.84%. Comparing base (e03ab6f) to head (3980037).
Report is 176 commits behind head on master.

Files with missing lines	Patch %	Lines
nipype/interfaces/cmtk/cmtk.py	0.00%	2 Missing ⚠️
nipype/interfaces/dcm2nii.py	0.00%	2 Missing ⚠️
nipype/algorithms/misc.py	0.00%	1 Missing ⚠️
nipype/interfaces/cmtk/nx.py	0.00%	1 Missing ⚠️
nipype/interfaces/dipy/simulate.py	0.00%	1 Missing ⚠️
nipype/interfaces/freesurfer/preprocess.py	0.00%	1 Missing ⚠️
nipype/interfaces/freesurfer/utils.py	0.00%	0 Missing and 1 partial ⚠️
...ne/plugins/tests/test_legacymultiproc_nondaemon.py	0.00%	1 Missing ⚠️
nipype/utils/filemanip.py	0.00%	1 Missing ⚠️
nipype/utils/nipype2boutiques.py	0.00%	1 Missing ⚠️

Additional details and impacted files

@@ Coverage Diff @@ ## master #3678 +/- ## ======================================= Coverage 70.83% 70.84% ======================================= Files 1276 1276 Lines 59320 59313 -7 Branches 9826 9826 ======================================= - Hits 42019 42018 -1  + Misses 16125 16119 -6  Partials 1176 1176 

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