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[FIX] Deduplicate dcm2niix output #3610

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Merged
merged 2 commits into from
Mar 21, 2024
Merged

[FIX] Deduplicate dcm2niix output #3610

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39b3a2c
Update dcm2nii.py
mauriliogenovese Oct 9, 2023
45e8076
Update nipype/interfaces/dcm2nii.py
mauriliogenovese Mar 21, 2024
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5 changes: 5 additions & 0 deletions nipype/interfaces/dcm2nii.py
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Original file line number Diff line number Diff line change
Expand Up @@ -485,6 +485,11 @@ def _parse_files(self, filenames):
mvecs.append(fl)
elif fl.endswith(".json") or fl.endswith(".txt"):
bids.append(fl)

# in siemens mosaic conversion nipype misread dcm2niix output and generate a duplicate list of results
# next line remove duplicates from output files array
outfiles = [*set(outfiles)]

self.output_files = outfiles
self.bvecs = bvecs
self.mvecs = mvecs
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