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ENH: Add CAT12 interfaces #3310

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Merged
merged 27 commits into from
Jun 1, 2021
Merged

ENH: Add CAT12 interfaces #3310

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533850b
Added cat12 interface.
mfmachado Mar 1, 2021
eb80b27
Updated .zenodo.json.
mfmachado Mar 1, 2021
f109163
Added interfaces to extract measures from the surface using CAT12.
mfmachado Mar 8, 2021
d8ca991
Improved documentation of the surface measures extraction.
mfmachado Mar 9, 2021
c906740
- Added examples to the segmentation.
mfmachado Mar 9, 2021
2885499
Improved documentation.
mfmachado Mar 9, 2021
98f118d
Added outputs to ExtractROIBasedSurfaceMeasures interface.
mfmachado Mar 9, 2021
7713f78
Added files to test the interfaces.
mfmachado Mar 9, 2021
44b8605
Added files to test the interfaces.
mfmachado Mar 9, 2021
1bed8ed
Minor fix
mfmachado Mar 9, 2021
d18eb1e
Merge remote-tracking branch 'origin/interface/cat12' into interface/…
mfmachado Mar 9, 2021
aa41da6
Bug fix in the output of ROIMeasures.
mfmachado Mar 15, 2021
dd152ee
Bug fix bias corrected file.
mfmachado Mar 31, 2021
ea72f5e
Update nipype/interfaces/cat12/preprocess.py
mfmachado Apr 1, 2021
89d3059
Added more variable descriptions.
mfmachado Apr 29, 2021
285eb05
Merge remote-tracking branch 'upstream/master' into interface/cat12
effigies Apr 30, 2021
04718ac
STY: black
effigies Apr 30, 2021
8a44b46
TEST: make specs
effigies Apr 30, 2021
e40fcb6
Correct TPM and dartel shooting template format;
mfmachado May 30, 2021
920b879
Added format utils.
mfmachado May 30, 2021
4f2511f
Merge branch 'master' into interface/cat12
mfmachado May 31, 2021
56a02f2
Reformatted preprocess.py.
mfmachado May 31, 2021
8a0ccae
Updated test_auto_CAT12Segment.py.
mfmachado May 31, 2021
cdcdba9
DOC: Add CAT12 to interfaces list
effigies May 31, 2021
20629a0
RF: Move format_utils to base
effigies Jun 1, 2021
fc4f82d
ENH: Add cat12 interfaces to __init__
effigies Jun 1, 2021
16f62fc
DOC: Minor cleanups
effigies Jun 1, 2021
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ENH: Add cat12 interfaces to __init__
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@effigies
effigies committed Jun 1, 2021
commit fc4f82daa7e092cf5faad0bd1597c1c2e2591dfc
5 changes: 5 additions & 0 deletions nipype/interfaces/cat12/__init__.py
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Original file line number Diff line number Diff line change
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from .preprocess import CAT12Segment
from .surface import (
ExtractAdditionalSurfaceParameters,
ExtractROIBasedSurfaceMeasures,
)