root@ng9e65017-master-instance-6fs0oczg:~# cd /mnt/Paddle/ root@ng9e65017-master-instance-6fs0oczg:/mnt/Paddle# docker run -it -v $PWD:/paddle -e "WITH_GPU=OFF" -e "WITH_AVX=OFF" -e "-DWITH_TESTING=OFF" paddlepaddle/paddle_manylinux_devel:cuda8.0_cudnn5 bash -x /paddle/paddle/scripts/docker/build.sh Unable to find image 'paddlepaddle/paddle_manylinux_devel:cuda8.0_cudnn5' locally cuda8.0_cudnn5: Pulling from paddlepaddle/paddle_manylinux_devel b26de5a391ad: Pull complete a860867675b2: Pull complete 2bb9cff4191c: Pull complete 3aba8ab86873: Pull complete 9049a3eb854a: Pull complete 2eeeee2cf356: Pull complete 94b0cc7a7f56: Pull complete 7a6ffb25b5c2: Pull complete aae8a9571a10: Pull complete 98e38f3d9bd6: Pull complete 227600d15519: Pull complete bfdc7823d165: Pull complete 981a5388ad80: Pull complete 3465c54c486b: Pull complete 43271940fb74: Pull complete a96aedd5b88f: Pull complete 162390d278bf: Pull complete 487a7f044b26: Pull complete Digest: sha256:22b4a3f34f46b645d624f30f9b12cbafc6ee517c784029d50eb26a68be502b16 Status: Downloaded newer image for paddlepaddle/paddle_manylinux_devel:cuda8.0_cudnn5 + set -xe + cmake_gen '' + mkdir -p /paddle/build + cd /paddle/build + rm '*.deb' + true + rm -rf /paddle/paddle/dist + PYTHON_FLAGS= + '[' '' '!=' '' ']' + cat ======================================== Configuring cmake in /paddle/build ... -DCMAKE_BUILD_TYPE=Release -DWITH_DSO=ON -DWITH_DOC=OFF -DWITH_GPU=OFF -DWITH_DISTRIBUTE=OFF -DWITH_MKL=ON -DWITH_AVX=OFF -DWITH_GOLANG=OFF -DCUDA_ARCH_NAME=All -DWITH_SWIG_PY=ON -DWITH_C_API=OFF -DWITH_PYTHON=ON -DWITH_SWIG_PY=ON -DCUDNN_ROOT=/usr/ -DWITH_STYLE_CHECK=ON -DWITH_TESTING=ON -DWITH_FAST_BUNDLE_TEST=ON -DCMAKE_EXPORT_COMPILE_COMMANDS=ON ======================================== + cmake .. -DCMAKE_BUILD_TYPE=Release -DWITH_DSO=ON -DWITH_DOC=OFF -DWITH_GPU=OFF -DWITH_DISTRIBUTE=OFF -DWITH_MKL=ON -DWITH_AVX=OFF -DWITH_GOLANG=OFF -DCUDA_ARCH_NAME=All -DWITH_SWIG_PY=ON -DWITH_C_API=OFF -DWITH_PYTHON=ON -DCUDNN_ROOT=/usr/ -DWITH_STYLE_CHECK=ON -DWITH_TESTING=ON -DWITH_FAST_BUNDLE_TEST=ON -DCMAKE_EXPORT_COMPILE_COMMANDS=ON -- Found Paddle host system: centos, version: 6.9 -- Found Paddle host system's CPU: 6 cores -- The CXX compiler identification is GNU 4.8.2 -- The C compiler identification is GNU 4.8.2 -- Check for working CXX compiler: /opt/rh/devtoolset-2/root/usr/bin/c++ -- Check for working CXX compiler: /opt/rh/devtoolset-2/root/usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /opt/rh/devtoolset-2/root/usr/bin/cc -- Check for working C compiler: /opt/rh/devtoolset-2/root/usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- CXX compiler: /opt/rh/devtoolset-2/root/usr/bin/c++, version: GNU 4.8.2 -- C compiler: /opt/rh/devtoolset-2/root/usr/bin/cc, version: GNU 4.8.2 -- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE) -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found Git: /usr/bin/git (found version "1.7.1") -- Performing Test MMX_FOUND -- Performing Test MMX_FOUND - Success -- Performing Test SSE2_FOUND -- Performing Test SSE2_FOUND - Success -- Performing Test SSE3_FOUND -- Performing Test SSE3_FOUND - Success -- Performing Test AVX_FOUND -- Performing Test AVX_FOUND - Success -- Performing Test AVX2_FOUND -- Performing Test AVX2_FOUND - Success -- Protobuf protoc executable: /paddle/build/third_party/install/protobuf/bin/protoc -- Protobuf library: /paddle/build/third_party/install/protobuf/lib/libprotobuf.a -- Protobuf version: 3.1 -- Could NOT find PythonInterp: Found unsuitable version "2.6.6", but required is at least "2.7" (found /usr/bin/python2) -- Could NOT find PythonLibs (missing: PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) (Required is at least version "2.7") -- Found cblas and lapack in MKLML (include: /paddle/build/third_party/install/mklml/mklml_lnx_2018.0.1.20171007/include, library: /paddle/build/third_party/install/mklml/mklml_lnx_2018.0.1.20171007/lib/libmklml_intel.so) -- BLAS library: /paddle/build/third_party/install/mklml/mklml_lnx_2018.0.1.20171007/lib/libmklml_intel.so -- Set /paddle/build/third_party/install/mkldnn/lib to runtime path -- Build MKLDNN with MKLML /paddle/build/third_party/install/mklml/mklml_lnx_2018.0.1.20171007 -- MKLDNN library: /paddle/build/third_party/install/mkldnn/lib/libmkldnn.so -- Found SWIG: /usr/local/bin/swig (found version "2.0.12") -- warp-ctc library: /paddle/build/third_party/install/warpctc/lib/libwarpctc.so -- Enable Intel OpenMP with /paddle/build/third_party/install/mklml/mklml_lnx_2018.0.1.20171007/lib/libiomp5.so -- Looking for UINT64_MAX -- Looking for UINT64_MAX - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of pthread_spinlock_t -- Check size of pthread_spinlock_t - done -- Check size of pthread_barrier_t -- Check size of pthread_barrier_t - done -- Performing Test C_COMPILER_SUPPORT_FLAG__fPIC -- Performing Test C_COMPILER_SUPPORT_FLAG__fPIC - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__fPIC -- Performing Test CXX_COMPILER_SUPPORT_FLAG__fPIC - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__fno_omit_frame_pointer -- Performing Test C_COMPILER_SUPPORT_FLAG__fno_omit_frame_pointer - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__fno_omit_frame_pointer -- Performing Test CXX_COMPILER_SUPPORT_FLAG__fno_omit_frame_pointer - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wall -- Performing Test C_COMPILER_SUPPORT_FLAG__Wall - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wall -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wall - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wextra -- Performing Test C_COMPILER_SUPPORT_FLAG__Wextra - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wextra -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wextra - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Werror -- Performing Test C_COMPILER_SUPPORT_FLAG__Werror - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Werror -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Werror - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wnon_virtual_dtor -- Performing Test C_COMPILER_SUPPORT_FLAG__Wnon_virtual_dtor - Failed -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wnon_virtual_dtor -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wnon_virtual_dtor - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wdelete_non_virtual_dtor -- Performing Test C_COMPILER_SUPPORT_FLAG__Wdelete_non_virtual_dtor - Failed -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wdelete_non_virtual_dtor -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wdelete_non_virtual_dtor - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_unused_parameter -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_unused_parameter - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_unused_parameter -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_unused_parameter - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_unused_function -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_unused_function - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_unused_function -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_unused_function - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_literal_suffix -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_literal_suffix - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_literal_suffix -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_literal_suffix - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_sign_compare -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_sign_compare - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_sign_compare -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_sign_compare - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_unused_local_typedefs -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_unused_local_typedefs - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_unused_local_typedefs -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_unused_local_typedefs - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_parentheses_equality -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_parentheses_equality - Failed -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_parentheses_equality -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_parentheses_equality - Failed -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_ignored_attributes -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_ignored_attributes - Failed -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_ignored_attributes -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_ignored_attributes - Failed -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_terminate -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_terminate - Failed -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_terminate -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_error_terminate - Failed -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_unused_function -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_unused_function - Success -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_array_bounds -- Performing Test C_COMPILER_SUPPORT_FLAG__Wno_error_array_bounds - Success -- Paddle version is 0.11.1a1 -- Compile with MKLDNNMatrix -- Compile with MKLDNNLayers and MKLDNNActivations -- Compile with MKLPackedLayers -- Performing Test CXX_COMPILER_SUPPORT_FLAG__ftls_model_global_dynamic -- Performing Test CXX_COMPILER_SUPPORT_FLAG__ftls_model_global_dynamic - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_parentheses_equality -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_parentheses_equality - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_self_assign -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_self_assign - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_maybe_uninitialized -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_maybe_uninitialized - Success -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_missing_field_initializers -- Performing Test CXX_COMPILER_SUPPORT_FLAG__Wno_missing_field_initializers - Success CMake Error: The following variables are used in this project, but they are set to NOTFOUND. Please set them or make sure they are set and tested correctly in the CMake files: PYTHON_LIBRARY (ADVANCED) linked by target "GemmConvOpTest" in directory /paddle/paddle/function linked by target "DepthwiseConvOpTest" in directory /paddle/paddle/function linked by target "Im2ColTest" in directory /paddle/paddle/function linked by target "test_StringUtils" in directory /paddle/paddle/utils/tests linked by target "test_Thread" in directory /paddle/paddle/utils/tests linked by target "test_Error" in directory /paddle/paddle/utils/tests linked by target "test_CustomStackTracePrint" in directory /paddle/paddle/utils/tests linked by target "test_CustomStackTrace" in directory /paddle/paddle/utils/tests linked by target "test_ThreadBarrier" in directory /paddle/paddle/utils/tests linked by target "test_SpinLock" in directory /paddle/paddle/utils/tests linked by target "test_SIMDFlags" in directory /paddle/paddle/utils/tests linked by target "test_CpuGpuVector" in directory /paddle/paddle/math/tests linked by target "test_Matrix" in directory /paddle/paddle/math/tests linked by target "test_sparseMatrixCompare" in directory /paddle/paddle/math/tests linked by target "test_matrixCompare" in directory /paddle/paddle/math/tests linked by target "test_perturbation" in directory /paddle/paddle/math/tests linked by target "test_TrainingAlgorithm" in directory /paddle/paddle/math/tests linked by target "test_SIMDFunctions" in directory /paddle/paddle/math/tests linked by target "test_RowBuffer" in directory /paddle/paddle/math/tests linked by target "test_SparseMatrix" in directory /paddle/paddle/math/tests linked by target "test_ExecViaCpu" in directory /paddle/paddle/math/tests linked by target "test_BaseMatrix" in directory /paddle/paddle/math/tests linked by target "test_Allocator" in directory /paddle/paddle/math/tests linked by target "test_FPException" in directory /paddle/paddle/math/tests linked by target "test_Tensor" in directory /paddle/paddle/math/tests linked by target "test_lazyAssign" in directory /paddle/paddle/math/tests linked by target "test_GpuProfiler" in directory /paddle/paddle/math/tests linked by target "test_CompareSparse" in directory /paddle/paddle/gserver/tests linked by target "test_CRFLayerGrad" in directory /paddle/paddle/gserver/tests linked by target "test_LayerGrad" in directory /paddle/paddle/gserver/tests linked by target "test_ConvTrans" in directory /paddle/paddle/gserver/tests linked by target "test_PriorBox" in directory /paddle/paddle/gserver/tests linked by target "test_RecurrentGradientMachine" in directory /paddle/paddle/gserver/tests linked by target "test_MultinomialSampler" in directory /paddle/paddle/gserver/tests linked by target "test_LinearChainCRF" in directory /paddle/paddle/gserver/tests linked by target "test_ActivationGrad" in directory /paddle/paddle/gserver/tests linked by target "test_RecurrentLayer" in directory /paddle/paddle/gserver/tests linked by target "test_DetectionOutput" in directory /paddle/paddle/gserver/tests linked by target "test_ConvUnify" in directory /paddle/paddle/gserver/tests linked by target "test_NetworkCompare" in directory /paddle/paddle/gserver/tests linked by target "test_MKLDNN" in directory /paddle/paddle/gserver/tests linked by target "test_WarpCTCLayer" in directory /paddle/paddle/gserver/tests linked by target "test_Evaluator" in directory /paddle/paddle/gserver/tests linked by target "test_BatchNorm" in directory /paddle/paddle/gserver/tests linked by target "test_CrossEntropyOverBeamGrad" in directory /paddle/paddle/gserver/tests linked by target "test_KmaxSeqScore" in directory /paddle/paddle/gserver/tests linked by target "test_Expand" in directory /paddle/paddle/gserver/tests linked by target "test_MaxPoolingWithMaskOutput" in directory /paddle/paddle/gserver/tests linked by target "test_PyDataProvider2" in directory /paddle/paddle/gserver/tests linked by target "test_PyDataProvider" in directory /paddle/paddle/gserver/tests linked by target "test_SeqSliceLayerGrad" in directory /paddle/paddle/gserver/tests linked by target "test_CompareTwoNets" in directory /paddle/paddle/gserver/tests linked by target "test_argument" in directory /paddle/paddle/parameter/tests linked by target "test_common" in directory /paddle/paddle/parameter/tests linked by target "paddle_pserver_main" in directory /paddle/paddle/pserver linked by target "socket_test" in directory /paddle/paddle/pserver/test linked by target "test_ParameterServer2" in directory /paddle/paddle/pserver/test linked by target "test_ProtoServer" in directory /paddle/paddle/pserver/test linked by target "paddle_trainer" in directory /paddle/paddle/trainer linked by target "paddle_merge_model" in directory /paddle/paddle/trainer linked by target "test_PyDataProviderWrapper" in directory /paddle/paddle/trainer/tests linked by target "test_Trainer" in directory /paddle/paddle/trainer/tests linked by target "test_Compare" in directory /paddle/paddle/trainer/tests linked by target "test_TrainerOnePass" in directory /paddle/paddle/trainer/tests linked by target "test_recurrent_machine_generation" in directory /paddle/paddle/trainer/tests linked by target "_swig_paddle" in directory /paddle/paddle/api linked by target "protobuf_equal" in directory /paddle/python/paddle/trainer_config_helpers/tests -- Configuring incomplete, errors occurred! See also "/paddle/build/CMakeFiles/CMakeOutput.log". See also "/paddle/build/CMakeFiles/CMakeError.log". 

Determining if the pthread_create exist failed with the following output: Change Dir: /paddle/build/CMakeFiles/CMakeTmp Run Build Command:"/usr/bin/gmake" "cmTC_ea34e/fast" /usr/bin/gmake -f CMakeFiles/cmTC_ea34e.dir/build.make CMakeFiles/cmTC_ea34e.dir/build gmake[1]: Entering directory `/paddle/build/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_ea34e.dir/CheckSymbolExists.c.o /opt/rh/devtoolset-2/root/usr/bin/cc -fPIC -o CMakeFiles/cmTC_ea34e.dir/CheckSymbolExists.c.o -c /paddle/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c Linking C executable cmTC_ea34e /usr/local/bin/cmake -E cmake_link_script CMakeFiles/cmTC_ea34e.dir/link.txt --verbose=1 /opt/rh/devtoolset-2/root/usr/bin/cc -fPIC CMakeFiles/cmTC_ea34e.dir/CheckSymbolExists.c.o -o cmTC_ea34e -rdynamic CMakeFiles/cmTC_ea34e.dir/CheckSymbolExists.c.o: In function `main': CheckSymbolExists.c:(.text+0x1b): undefined reference to `pthread_create' collect2: error: ld returned 1 exit status gmake[1]: *** [cmTC_ea34e] Error 1 gmake[1]: Leaving directory `/paddle/build/CMakeFiles/CMakeTmp' gmake: *** [cmTC_ea34e/fast] Error 2 File /paddle/build/CMakeFiles/CMakeTmp/CheckSymbolExists.c: /* */ #include <pthread.h> int main(int argc, char** argv) { (void)argv; #ifndef pthread_create return ((int*)(&pthread_create))[argc]; #else (void)argc; return 0; #endif } Determining if the function pthread_create exists in the pthreads failed with the following output: