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Update alpha.md #183

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3 changes: 3 additions & 0 deletions docs/apps/alpha.md
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<h1> Applications in alphabetic order</h1>
<!-- head -2 alpha.md > tmp; grep \* index.md | sort | uniq >> tmp;mv tmp alpha.md -->
* [Abaqus](abaqus.md) Dassault Systemes' SIMULIA academic research suite
* [ANSYS](ansys.md) ANSYS Academic engineering simulation software software suite
* [BAMtools](bamtools.md) Tools for working with BAM formatted files
* [Bioconda](bioconda.md) Package manger for installing bioinformatics software
* [BioPerl](bioperl.md) Perl environment with bioperl extension
Expand All @@ -23,6 +25,7 @@
* [Illumina BaseSpace](bs.md) Command line client for retrieving data from the Illumina BaseSpace environment
* [Julia](julia.md) High-level, high-performance dynamic programming language for numerical computing
* [LAStools](lastools.md) Toolbox for LiDAR datasets
* [LD-DYNA](lsdyna.md) General-purpose finite element program
* [Megahit](megahit.md) Metagenomics assebly
* [Minimap2](minimap2.md) Short read aligner
* [MXNet](mxnet.md) Deep learning library for Python
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