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alexaburchak / HMMProfiler

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This repository offers two pipelines to process NGS data by identifying and counting functional regions based on profile HMMs and matching query sequences to these regions based on similarity. This work was carried out as part of my master's thesis at Lund University, completed at Bionamic AB.

ngs hmmer3 seqkit
  • Updated May 26, 2025
  • JavaScript

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