End-to-end analysis of the PBMC 3k single-cell RNA-seq dataset using Python and Scanpy, including preprocessing, UMAP visualization, Leiden clustering, cell type annotation, and marker gene identification.
- Updated
Jul 3, 2025 - Jupyter Notebook
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pbmc3k
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Comparison of Seurat normalization workflows and manual vs. SeuratData cluster labeling on the PBMC3k dataset.
- Updated
Nov 5, 2025 - R
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