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  1. Klebsiella_pneumoniae_drug_mutations_discovery Klebsiella_pneumoniae_drug_mutations_discovery Public

    This script performs bacterial genomic analysis - such as SNP calling & antibiotic resistance detection in Klebsiella pneumoniae (FastQC, Snippy, AMR gene screening)

    Shell 4 2

  2. Mtb_common_drug_mutations_discovery Mtb_common_drug_mutations_discovery Public

    Script summarizes Mycobacterium tuberculosis genotypes & drug resistance profiles from result files. It detects Uganda-specific lineages and resistance-associated mutations across key anti-TB drugs.

    Shell 2 2

  3. gmboowa.github.io gmboowa.github.io Public template

    Forked from mikensubuga/mikensubuga.github.io

    My Personal Website: Publications, Repositories, Projects, Resources & Media

    HTML 2

  4. rMAP rMAP Public

    Forked from GunzIvan28/rMAP

    Bacterial analysis toolbox for full ESKAPEE pathogen characterisation and profiling the resistome, mobilome, virulome & phylogenomics using WGS

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  5. vcf-annotator vcf-annotator Public

    Forked from rpetit3/vcf-annotator

    Add biological annotations to variants in a given VCF file.

    Python 1

  6. pathogengenomics pathogengenomics Public

    Comprehensive genomic workflow - reference data retrieval, variant calling, custom database setup, annotation, & missense variant filtering

    Python 1