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Pull requests: OpenGene/fastp

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Pull requests list

adds specific output of number of adapter dimers observed
#644 opened Dec 4, 2025 by bwlang Loading…
Enable zstd compression format
#640 opened Nov 19, 2025 by GilbertHan1011 Loading…
Verify polyX trimming occurs after adapter trimming (already fixed)
#636 opened Oct 11, 2025 by Copilot AI • Draft
1
@sfchen
Makefile: Respect build environment, add destdir support
#619 opened Jun 21, 2025 by outpaddling Loading…
1
Use EX_USAGE for missing arguments in main()
#615 opened Jun 17, 2025 by hayzamjs Loading…
feat: sets trim-poly-G as True for one-color-system too (iSeq 100)
#598 opened Feb 20, 2025 by Coppini Loading…
1
Added a new function(umi_skipb) to the program to skip the specified bp number before trim the UMI sequence.
#550 opened Mar 8, 2024 by biolxy Loading…
minor typo fix
#546 opened Feb 12, 2024 by Gaura Loading…
2
cuting doesn't interfere with deduplication
#545 opened Feb 9, 2024 by SilasK Loading…
Fix typo
#544 opened Feb 6, 2024 by fplazaonate Loading…
2
check read errors in fastqreader
#533 opened Nov 15, 2023 by jchorl Loading…
Add a Docker container
#527 opened Oct 11, 2023 by maol-corteva Loading…
3
Remove the hardcoded trim tail and trim front length limitations
#525 opened Oct 2, 2023 by shinthor Loading…
1
Fix ReadPair's never being freed
#515 opened Aug 15, 2023 by Donwulff Loading…
2
Update list of sequencers for poly-g trimming
#508 opened Jul 14, 2023 by semenko Loading…
6
Fix for 2 bugs in the fastq reader:
#497 opened Jun 15, 2023 by wdu Loading…
fix average q-score calculation
#495 opened May 31, 2023 by DrinnanSante Loading…
[Bug] Handle empty output from fastp
#482 opened Apr 26, 2023 by rzlim08 Loading…
2
rem useless files
#476 opened Mar 24, 2023 by KimBioInfoStudio Loading…
1
Add args for adjusting mismatch number
#311 opened Jan 4, 2021 by y9c Loading…
1
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