- momics: cloud-native storage and query infrastructure for multi-omics data
- hicstuff: lightweight library/pipeline to generate and handle Hi-C data
- metator: Metagenomic binning based on Hi-C data
- nf-metator: Scalable containerized processing of metagenomic data with metator in nextflow
| Doc 📘 | Bioconductor 🧬 | Bioc builds ⚙️ | Github 📦 | Github checks 🧾 | Lifecycle 🍃 |
|---|---|---|---|---|---|
| Doc | tidyCoverage | Bioc release: Bioc devel:  | tidyCoverage |  |  |
| Doc | plyinteractions | Bioc release: Bioc devel:  | plyinteractions |  | |
| Doc | OHCA | Bioc release Bioc devel | OHCA |  | |
| Doc | BiocBook | Bioc release: Bioc devel:  | BiocBook |  | |
| Doc | HiCExperiment | Bioc release: Bioc devel:  | HiCExperiment |  | |
| Doc | HiContacts | Bioc release: Bioc devel:  | HiContacts |  | |
| Doc | HiCool | Bioc release: Bioc devel:  | HiCool |  | |
| Doc | HiContactsData | Bioc release: Bioc devel: | HiContactsData |  |  |
| Doc | DNAZooData | Bioc release: Bioc devel: | DNAZooData |  | |
| Doc | fourDNData | Bioc release: Bioc devel: | fourDNData |  | |
| Doc | VplotR | Bioc release: Bioc devel:  | VplotR |  | |
| Doc | periodicDNA | Bioc release: Bioc devel:  | periodicDNA | - | |
- tinyMapper: Versatile pipeline to process a variety of genome-wide assays
- autobcl2fastq: Automatically fetch data from a remote sequencer directory, demultiplex fastq files, trim adaptors and run some preliminary QCs