Initial commit

Author: subpic

Dockerfile

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+FROM nvidia/cuda:9.0-cudnn7-runtime-ubuntu16.04
+# Contributors: Syed Navaid (https://github.com/syedahmad)
+# Vlad Hosu (https://github.com/subpic)
+
+RUN apt-get update && apt-get install -y \
+wget \
+vim \
+bzip2 \
+graphviz \
+mc \
+htop \
+emacs-nox \
+rsync \
+less \
+curl \
+#software-properties-common \
+build-essential \
+ libfreetype6-dev \
+ libpng12-dev \
+ openssh-client
+
+RUN curl -s https://packagecloud.io/install/repositories/github/git-lfs/script.deb.sh | bash
+
+#Downgrade CUDA, TF issue: https://github.com/tensorflow/tensorflow/issues/17566#issuecomment-372490062
+RUN apt-get install --allow-downgrades --allow-change-held-packages -y libcudnn7=7.0.5.15-1+cuda9.0 git-lfs
+
+#Install MINICONDA
+RUN wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O Miniconda.sh && \
+/bin/bash Miniconda.sh -b -p /opt/conda && \
+rm Miniconda.sh
+
+ENV PATH /opt/conda/bin:$PATH
+
+#Install ANACONDA Environment
+RUN conda create -y -n jupyter_env python=3.6 nb_conda_kernels py-xgboost-gpu \
+anaconda ipykernel tensorflow-gpu keras-gpu matplotlib numpy scipy pandas \
+Pillow pydot munch scikit-learn && \
+/opt/conda/envs/jupyter_env/bin/pip install jupyter-tensorboard gitless opencv-python && \
+/opt/conda/envs/jupyter_env/bin/python -m ipykernel.kernelspec
+
+RUN conda create -y -n jupyter_env27 python=2.7 nb_conda_kernels py-xgboost-gpu \
+anaconda ipykernel tensorflow-gpu keras-gpu matplotlib numpy scipy pandas \
+Pillow pydot munch scikit-learn && \
+/opt/conda/envs/jupyter_env27/bin/pip install jupyter-tensorboard gitless opencv-python && \
+/opt/conda/envs/jupyter_env27/bin/python -m ipykernel.kernelspec
+
+# Install OpenCV
+RUN apt-get update && apt-get install -y libopencv-dev && \
+ echo 'ln /dev/null /dev/raw1394' >> ~/.bashrc
+
+RUN set -x \
+ && cd /tmp \
+ && wget https://github.com/sdg-mit/gitless/releases/download/v0.8.8/gl-v0.8.8-linux-x86_64.tar.gz \
+ && tar -C /usr/bin/ -xvf gl-v0.8.8-linux-x86_64.tar.gz --strip-components=1 \
+ && rm -f gl-v0.8.8-linux-x86_64.tar.gz
+
+COPY docker_deps/entrypoint.sh /root/
+COPY tests/test_libraries.py /tmp/
+COPY configs/jupyter_notebook_config.py /root/.jupyter/
+
+RUN chmod +x /root/entrypoint.sh && \
+ chown -R 777 /tmp/test_libraries.py
+
+ENV LC_ALL=C.UTF-8 LANG=C.UTF-8
+ENV PYTHONPATH='/mnt/home/research/:/mnt/home/:$PYTHONPATH'
+ENV PASSWORD unknownknowns
+ENV LD_LIBRARY_PATH /usr/local/cuda/lib64:$LD_LIBRARY_PATH
+
+WORKDIR /mnt/home/
+
+# IPython
+EXPOSE 8888 6006
+
+CMD bash /root/entrypoint.sh

build.sh

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+docker build -f Dockerfile -t jupyter-data-science .

configs/jupyter_notebook_config.py

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+# Copyright 2015 The TensorFlow Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+# ==============================================================================
+import os
+from IPython.lib import passwd
+
+c.JupyterApp.ip = '*'
+c.JupyterApp.port = int(os.getenv('PORT', 8888))
+c.JupyterApp.open_browser = False
+c.MultiKernelManager.default_kernel_name = 'jupyter_env'
+c.JupyterApp.terminado_settings = { 'shell_command': ['bash'] }
+
+# sets a password if PASSWORD is set in the environment
+if 'PASSWORD' in os.environ:
+ c.JupyterApp.password = passwd(os.environ['PASSWORD'])
+ del os.environ['PASSWORD']

docker_deps/entrypoint.sh

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+#!/usr/bin/env bash
+# Copyright 2015 The TensorFlow Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+# http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+# ==============================================================================
+
+conda init bash
+nohup /opt/conda/envs/jupyter_env/bin/tensorboard --logdir=/mnt/home/research/data/logs&
+/opt/conda/envs/jupyter_env/bin/jupyter-lab "$@" --allow-root