Merge branch 'main' into add-recommended-dependencies-as-extras_require-in-setup.cfg

Author: JMBurley

.github/CODE_OF_CONDUCT.md

@@ -6,8 +6,8 @@ runs:
 
  - name: Environment Detail
  run: |
- conda info
- conda list
+ micromamba info
+ micromamba list
  shell: bash -el {0}
 
  - name: Build Pandas
@@ -17,4 +17,6 @@ runs:
  shell: bash -el {0}
  env:
  # Cannot use parallel compilation on Windows, see https://github.com/pandas-dev/pandas/issues/30873
- N_JOBS: ${{ runner.os == 'Windows' && 1 || 2 }}
+ # GH 47305: Parallel build causes flaky ImportError: /home/runner/work/pandas/pandas/pandas/_libs/tslibs/timestamps.cpython-38-x86_64-linux-gnu.so: undefined symbol: pandas_datetime_to_datetimestruct
+ N_JOBS: 1
+ #N_JOBS: ${{ runner.os == 'Windows' && 1 || 2 }}

.github/CONTRIBUTING.md

@@ -0,0 +1,27 @@
+name: Run tests and report results
+runs:
+ using: composite
+ steps:
+ - name: Test
+ run: ci/run_tests.sh
+ shell: bash -el {0}
+
+ - name: Publish test results
+ uses: actions/upload-artifact@v2
+ with:
+ name: Test results
+ path: test-data.xml
+ if: failure()
+
+ - name: Report Coverage
+ run: coverage report -m
+ shell: bash -el {0}
+ if: failure()
+
+ - name: Upload coverage to Codecov
+ uses: codecov/codecov-action@v2
+ with:
+ flags: unittests
+ name: codecov-pandas
+ fail_ci_if_error: false
+ if: failure()

.github/FUNDING.yml

@@ -6,8 +6,8 @@ inputs:
  environment-name:
  description: Name to use for the Conda environment
  default: test
- python-version:
- description: Python version to install
+ extra-specs:
+ description: Extra packages to install
  required: false
  pyarrow-version:
  description: If set, overrides the PyArrow version in the Conda environment to the given string.
@@ -24,14 +24,13 @@ runs:
  if: ${{ inputs.pyarrow-version }}
 
  - name: Install ${{ inputs.environment-file }}
- uses: conda-incubator/setup-miniconda@v2.1.1
+ uses: mamba-org/provision-with-micromamba@v12
  with:
  environment-file: ${{ inputs.environment-file }}
- activate-environment: ${{ inputs.environment-name }}
- python-version: ${{ inputs.python-version }}
- channel-priority: ${{ runner.os == 'macOS' && 'flexible' || 'strict' }}
+ environment-name: ${{ inputs.environment-name }}
+ extra-specs: ${{ inputs.extra-specs }}
  channels: conda-forge
- mamba-version: "0.24"
- use-mamba: true
- use-only-tar-bz2: true
+ channel-priority: ${{ runner.os == 'macOS' && 'flexible' || 'strict' }}
  condarc-file: ci/condarc.yml
+ cache-env: true
+ cache-downloads: true

.github/SECURITY.md

@@ -12,6 +12,9 @@ on:
  paths-ignore:
  - "doc/**"
 
+permissions:
+ contents: read
+
 jobs:
  pytest:
  runs-on: ubuntu-latest

.github/actions/build_pandas/action.yml

@@ -3,8 +3,14 @@ on:
  issue_comment:
  types: created
 
+permissions:
+ contents: read
+
 jobs:
  issue_assign:
+ permissions:
+ issues: write
+ pull-requests: write
  runs-on: ubuntu-latest
  steps:
  - if: github.event.comment.body == 'take'

.github/actions/run-tests/action.yml

@@ -9,8 +9,15 @@ env:
  ENV_FILE: environment.yml
  COMMENT: ${{github.event.comment.body}}
 
+permissions:
+ contents: read
+
 jobs:
  autotune:
+ permissions:
+ contents: read
+ issues: write
+ pull-requests: write
  name: "Run benchmarks"
  # TODO: Support more benchmarking options later, against different branches, against self, etc
  if: startsWith(github.event.comment.body, '@github-actions benchmark')
@@ -33,12 +40,6 @@ jobs:
  with:
  fetch-depth: 0
 
- - name: Cache conda
- uses: actions/cache@v3
- with:
- path: ~/conda_pkgs_dir
- key: ${{ runner.os }}-conda-${{ hashFiles('${{ env.ENV_FILE }}') }}
-
  # Although asv sets up its own env, deps are still needed
  # during discovery process
  - name: Set up Conda