Error in Mrtrix3's DWIPreproc #3595
Description
Summary
The _list_outputs method of DWIPreproc tries to set up an input called "export_grad_mrtrix", which should be "out_grad_mrtrix", causing it to fail.
Actual behavior
AttributeError: 'DWIPreprocInputSpec' object has no attribute 'export_grad_mrtrix'Expected behavior
No AttributeError raising when running DWIPreproc...
How to replicate the behavior
from nipype.interfaces import mrtrix3 as mrt dwipreproc = mrt.DWIPreproc(rpe_options="pair", align_seepi=True,) dwipreproc.inputs.pe_dir = "j-" dwipreproc.inputs.in_epi = "path_to_epi" dwipreproc.inputs.dwi_file = "path_to_dwi" dwipreproc.run()Platform details:
{'commit_hash': 'c31d206', 'commit_source': 'repository', 'networkx_version': '2.8.4', 'nibabel_version': '4.0.1', 'nipype_version': '1.8.6', 'numpy_version': '1.23.0', 'pkg_path': '/home/zvi/Projects/connectome_plasticity/venv/lib/python3.9/site-packages/nipype', 'scipy_version': '1.8.1', 'sys_executable': '/home/zvi/Projects/connectome_plasticity/venv/bin/python', 'sys_platform': 'linux', 'sys_version': '3.9.14 (main, Sep 7 2022, 23:43:29) \n[GCC 9.4.0]', 'traits_version': '6.3.2'} Execution environment
- My python environment outside container