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BioJava in Jupyter Notebooks

GitHub License

This repository demonstrates how to run BioJava applications in a Jupyter Notebook and Jupyter Lab.

This project uses the Java Kernel developed by the BeakerX project, a collection of kernels that provide JVM support for Jupyter Notebook and Lab.

The nbviewer links below provide a non-interactive preview of notebooks and the launch links launch the notebooks in Jupyter Notebook and Jupyter Lab in your web browser using the Binder (mybinder.org) server (may be slow!).


nbviewer Jupyter Notebook Jupyter Lab
ProteinChainShapeAnalysis.ipynb Binder Binder

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